Notification:

This is highly recommended to use the standalone version of RBPSpot for model building. It is a compute intensive process. The standalone version of RBPSpot is available at Github. Download standalone version here. 


Illustration of parameters:





Select sequence length:   Min :                   Max :


Data Split:   (Training %) :       (Testing %) :



Number of Epochs :



Sliding window size for density calculations :




Please specify a file:

Enter CLIP-seq Peak data in format  (or paste an example)

    




  • RBPSpot: Learning on Appropriate Contextual Information for RBP Binding Sites Discovery
    Nitesh Kumar Sharma, Sagar Gupta, Ashwani Kumar, Prakash Kumar, Upendra Kumar Pradhan, Ravi Shankar*
    iScience, 2021  Read research article here 

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    Last Updated: November 26, 2021